Educational content only. This article is not medical advice, a diagnosis, or a treatment recommendation. It does not create a physician-patient or provider-patient relationship. Clinical decisions should be made with your treating physician.
Before You Read

This guide explains what IHC testing is and how it is used in pathology — it is educational, not clinical. What your specific IHC results mean for your diagnosis and treatment is a conversation for your treating physician or oncologist, who has the full context of your care.

You received your pathology report and partway through — sometimes in its own section, sometimes embedded in the diagnosis line — you encountered a list of tests with names you do not recognize, followed by results like "positive," "negative," "3+," or percentages. These are your immunohistochemistry results, and they can be among the most difficult parts of a report to understand without context.

The good news: once you understand what IHC is and why it is done, those results start to make sense.

What Is Immunohistochemistry?

Immunohistochemistry — IHC for short — is a laboratory technique that uses antibodies to detect specific proteins in tissue samples. Here is how it works in plain language:

Every cell in your body produces proteins. The proteins a cell produces are determined by what type of cell it is and what it is doing. Cancer cells often produce proteins in abnormal quantities, or produce proteins not normally found in that tissue type. IHC uses highly specific antibodies — proteins that bind only to a particular target — to detect whether a specific protein is present in your tissue, and in what quantity.

The result is a stained microscopic slide where the presence of a protein shows up as a specific color, allowing the pathologist to see precisely which cells are producing that protein and how strongly.

In Simple Terms

Think of IHC as a molecular fingerprint test. Different tumor types produce different protein fingerprints. IHC helps the pathologist confirm what type of tumor is present, how it is likely to behave, and in many cases, what treatments it may respond to.

Why Was IHC Ordered on My Tissue?

Pathologists order IHC for several distinct reasons, and more than one may apply to your case:

To Confirm the Diagnosis

Some tumors look similar under the microscope but are biologically different — they arise from different cell types and respond to different treatments. IHC helps the pathologist distinguish between them with greater certainty. For example, a small round cell tumor might look similar to several different cancer types under a standard H&E stain, but an IHC panel can identify which proteins are present and point definitively to the correct diagnosis.

To Determine the Origin of a Metastatic Tumor

When cancer is found at a site away from its original location — in a lymph node, in the liver, in the lung — the pathologist needs to determine where it came from. A breast cancer that has spread to the liver looks different from a primary liver cancer, even though both are in the liver. IHC markers help identify the tumor's tissue of origin, which directs treatment.

To Guide Treatment Decisions

This is where IHC becomes directly relevant to your care. Many cancer treatments work by targeting specific proteins. If your tumor expresses a particular protein, certain targeted therapies may be effective. If it does not, those same therapies will not work. Your physician uses IHC results to personalize your treatment plan.

The most widely known example is HER2 in breast cancer. HER2 is a protein that promotes cell growth. Breast cancers that overexpress HER2 (HER2-positive) respond to targeted anti-HER2 therapies. Cancers that do not overexpress HER2 (HER2-negative) do not respond to those same drugs. IHC is the primary test used to make that determination.

To Assess Prognosis

Some IHC markers provide information about how a tumor is likely to behave over time. The Ki-67 marker, for example, measures cellular proliferation — how rapidly cells are dividing. A high Ki-67 score indicates a more rapidly growing tumor, which factors into prognosis and sometimes treatment decisions.

How to Read IHC Results

IHC results are reported in several ways depending on the marker being tested:

Positive vs. Negative

The most basic IHC result: is the protein present or absent? Positive means the antibody found its target — the protein is present in the tissue. Negative means the protein was not detected. Whether positive or negative is the favorable result depends entirely on what is being tested and why.

Scored Results (0, 1+, 2+, 3+)

For some markers — HER2 is a common example — the result is reported on a scale. The scale reflects both how many cells are positive and how intensely they stain:

Percentage

For markers like Ki-67 and hormone receptors (estrogen receptor, progesterone receptor), results are often expressed as a percentage — the proportion of tumor cells that stained positive. A Ki-67 of 80% means 80% of the cells examined were actively dividing at the time the tissue was processed.

Common IHC Markers and What They Test For

ER / PR
Estrogen receptor and progesterone receptor. Used in breast cancer to determine whether the tumor is hormone-receptor positive — meaning it may respond to hormone-blocking therapies such as tamoxifen or aromatase inhibitors.
HER2
Human epidermal growth factor receptor 2. Overexpression indicates HER2-positive breast cancer, which may respond to targeted anti-HER2 therapies. Also tested in gastric and gastroesophageal cancers.
Ki-67
A marker of cellular proliferation — how actively cells are dividing. Used in grading certain tumors and assessing aggressiveness. Reported as a percentage.
TTF-1
Thyroid transcription factor-1. Expressed in thyroid and lung tissue. Helps identify lung adenocarcinomas and determine whether a metastatic tumor originated in the lung or thyroid.
CDX2
A marker associated with intestinal differentiation. Often used to identify tumors of intestinal origin — colon, small intestine — particularly in the setting of metastatic disease.
Desmin / SMA
Markers of smooth muscle differentiation. Used to confirm tumors arising from smooth muscle cells — such as leiomyosarcoma.
S100 / SOX10
Markers associated with neural crest and melanocytic differentiation. Used in the evaluation of melanoma and nerve sheath tumors.
MLH1, MSH2, MSH6, PMS2
Mismatch repair proteins. Used in colorectal and endometrial cancers to detect deficient mismatch repair (dMMR), which can indicate Lynch syndrome and may predict response to immunotherapy.

What If My IHC Result Is Equivocal?

An equivocal IHC result — most commonly a 2+ on HER2 testing — means the result is not clearly positive or negative, and additional testing is needed to clarify. The most common follow-up test is FISH (fluorescence in situ hybridization) or ISH (in situ hybridization), which examines the actual HER2 gene rather than the protein it produces. These tests provide a more definitive answer in equivocal cases.

If your report includes an equivocal result, ask your physician whether the reflex testing has been ordered and when results are expected.

Questions to Bring to Your Physician

Once you have reviewed your IHC results, consider bringing these questions to your next appointment:

Sentinel Clarity Report

If your pathology report includes IHC results and you would like a plain-language explanation of what each marker means in the context of your specific report — built around your actual questions — the Sentinel Clarity Report is designed for exactly that. Every SCR is written by a PA(ASCP) with 28 years of surgical pathology experience and delivered securely via encrypted message.

RW
Robert Weir, PA(ASCP)
Board-certified Pathologists' Assistant (PA(ASCP)) and founder of Sentinel Pathology Consulting, LLC. Robert brings 28 years of quaternary surgical pathology experience, 15 years as laboratory operations manager at two private surgical pathology laboratories, and a current academic role teaching gross surgical pathology to pathology residents.
Last updated: May 2026
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How to Read Your Pathology Report → What Is Immunohistochemistry (IHC)? → Understanding pTNM Staging → Request a Sentinel Clarity Report →